Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015834182.1_cds_XP_016505499.1_18834
CDS Infomation

[gene=LOC107823379] [db_xref=GeneID:107823379] [protein=plant UBX domain-containing protein 10-like] [protein_id=XP_016505499.1] [location=complement(join(14853..15083,15599..15802,15883..16053,18188..18961))] [gbkey=CDS]
Sequence

ATGGATGATGTAGCTGATAAAATAGCTAAATTTCAGGCAACAACTGGACTCGAAGACTCC
GATTTATGCACTGAAATTCTCTCCGCACATAATTGGGATCTCGAACTAGCGATCTCAAAT
TTCACCTCCAGTTCCACCGAAAATTACCGTTCTGCTTCTGAAGCTACTACTAGCACGATT
CCCGAAGAAGTGGAAACCGGACTTGTTGTCGGTGGGCCCCATGGACCGCCGCCAGGACTC
GCTTGGAAGATTATTACTCTGCCGTTTTCAATTATTTCCGGTAGTCTAGGGTTAATTTCA
GGAGCTGTTGGATTTGGTGTGTGGGCGGCTAGTGGAGTTCTTTCGTATGGATTAAGCATG
ATCGGGCTGAACTCGGGCCGAAATGGTGAGTCGTCGGCCCGTTTAGTGTCCGTATCTGCA
GCAGTATCAGAGGCTATGGATTTTGTTACTAGTTTCGAGAGGGATTTTGGTAGTTTAAAG
CCGAATTTTGTAGCTGAGGGTTTTATGGACGCATTGCAAAGGTCTAGGAATGAGTACAAG
CTACTGTTTGTTTATTTGCATTCACCGGATCATCAGGATACGCCTGTGTTTTGTGAAAAG
ACACTTTGTAATGAGGATTTGGTGGCGTTTATTAATGAGAATTTTGTTGCTTGGGGTGGA
AGTATTAGAGCTAGTGAAGGTTTTAAGATGAGTAATAGTTTGAAGGCTTCGAGGTTTCCG
TTTTGTGCTGTTGTAATGGCTGCGACGAACCAGAGGATCGCTTTGCTTCAGCAGGTGGAA
GGGCCAAAATCTCCTGAAGAATTGCTTACAGTACTGCAAAGAGTGATCGAGGAAAGTGCC
CCTGTGCTTGTCACGGCCAGGGTTGAGGCAGAAGAAAGAAGAAACAATATGCGTTTGAGG
GAGGAGCAAGATGCTGCTTATCGCACTGCGCTAGAAGCTGATCAGGCTAGAGAGCGTGAG
AGGAAAGAAGAGCAAGAGCGGCTGGAAAGGGAAGCTGCTGAAGCTGAAAGGAAAAGAAAG
GAGGAAGAAGAGGCCCAGGAAAGAGCTGCCCGTGAAGCTGCTGAAAGAGAAGCTGCATTA
GCTAAAATGCGCCAGGAGAAACTATTGGCATTGGGAACTGAACCTGAGAAGGGTCCTGAT
GTTACTCAAGTTTTGGTACGGTTTCCTACTGGAGAGCGCAAGGACAGGCGGTTTCATTGT
GCAACAACAATACAATCGTTGTATGACTATGTTGATTCTCTGGGATGCCTTGAGGTTGAC
AATTACAGCCTTGTATCCAACTTCCCCCGCACTGTGTATGGCGCAGAGAAGCTTTCTTTG
TCCCTTAAAGATGCTGGATTACATCCTCAGGCCAGCCTTTTTATTGAGTTGAGCTCATGA

Peptide Sequence

PEP ID

XP_016505499.1
PEP Infomation

PREDICTED: plant UBX domain-containing protein 10-like [Nicotiana tabacum]
Sequence

MDDVADKIAKFQATTGLEDSDLCTEILSAHNWDLELAISNFTSSSTENYRSASEATTSTI
PEEVETGLVVGGPHGPPPGLAWKIITLPFSIISGSLGLISGAVGFGVWAASGVLSYGLSM
IGLNSGRNGESSARLVSVSAAVSEAMDFVTSFERDFGSLKPNFVAEGFMDALQRSRNEYK
LLFVYLHSPDHQDTPVFCEKTLCNEDLVAFINENFVAWGGSIRASEGFKMSNSLKASRFP
FCAVVMAATNQRIALLQQVEGPKSPEELLTVLQRVIEESAPVLVTARVEAEERRNNMRLR
EEQDAAYRTALEADQARERERKEEQERLEREAAEAERKRKEEEEAQERAAREAAEREAAL
AKMRQEKLLALGTEPEKGPDVTQVLVRFPTGERKDRRFHCATTIQSLYDYVDSLGCLEVD
NYSLVSNFPRTVYGAEKLSLSLKDAGLHPQASLFIELSS

Transcript Sequence

Gene sequence data has not been registered.